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Public Member Functions | Protected Attributes | Private Attributes

AffymetrixChipMap Class Reference

Inheritance diagram for AffymetrixChipMap:
Inheritance graph
Collaboration diagram for AffymetrixChipMap:
Collaboration graph

List of all members.

Public Member Functions

 AffymetrixChipMap (const char *filename, unsigned skip_first_lines, unsigned snp_name_position, unsigned recoded_snp_name_position, unsigned phisical_position_position, unsigned strand_position, unsigned chromosome_position, unsigned allele_A_position, unsigned allele_B_position, unsigned reg1_position, char delim=',')
virtual std::string get_allele_A (const char *)
virtual std::string get_allele_B (const char *)
virtual std::string get_chromosome (const char *)
unsigned get_exclude_amount (void)
virtual std::string get_phisical_position (const char *)
virtual char get_strand (const char *)
virtual bool is_snp_in_map (std::string)
virtual std::string recode_snp (const char *)

Protected Attributes

std::map< std::string, map_valuesMap

Private Attributes

unsigned exclude_amount

Detailed Description

Definition at line 87 of file Chip.h.

The documentation for this class was generated from the following files:

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